2017-08-09T10:48:12Z (GMT) by
Sync file of allele coverage for Drosophila simulans SNPs in major chromosome arms (X, 2L, 2R, 3L, 3R). Columns in this sync file correspond to chromosome, position, base, Dsim_A_F0, Dsim_B_F0, Dsim_C_F0, Dsim_A_F60_Hot, Dsim_B_F60_Hot, Dsim_C_F60_Hot. Nomenclature of the samples is as follows: e.g. species_replicate_generation_selection regime. Species: Dsim (Drosophila simulans), replicate: letters (A-Z), generation: F#, # indicating the number of generations, and selection regime: Hot. Format specification of sync file is described in Kofler et al., PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq). Bioinformatics 2011;27:3435-3436. See main publication for additional information about data processing, SNP calling and filtering.