Megan results vampire bat virome
datasetposted on 18.12.2019 by Marina Escalera-Zamudio, Edith Rojas-Anaya, Sergios-Orestis Kolokotronis, Blanca Taboada, Elizabeth Loza-Rubio, Maria L. Méndez-Ojeda, Carlos F. Arias, Nikolaus Osterrieder, Alex D. Greenwood
Datasets usually provide raw data for analysis. This raw data often comes in spreadsheet form, but can be any collection of data, on which analysis can be performed.
TITLE: Assigned reads from the HTS data DESCRIPTION: MEGAN files corresponding to confirmed gammaherpervirus matching reads found within five Desmodus rotundus and Diphylla ecaudata vampire bat spleen samples. Viral assignment was performed using BLASTX against the GenBank non-redundant protein database and mapped with SMALT against a custom-built herpesviral database under a stringency of 60%. The γHV-matching reads were further selected by reciprocal BLASTX analysis using the following criteria: length of ≥100 bp, pairwise identity >50%, e-value <10-6, and independent hits to two different γHV proteins or at least two different regions of the same protein.