Vampbat_viromeDRYAD.zip (157.62 MB)

Megan results vampire bat virome

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posted on 18.12.2019 by Marina Escalera-Zamudio, Edith Rojas-Anaya, Sergios-Orestis Kolokotronis, Blanca Taboada, Elizabeth Loza-Rubio, Maria L. Méndez-Ojeda, Carlos F. Arias, Nikolaus Osterrieder, Alex D. Greenwood
TITLE: Assigned reads from the HTS data DESCRIPTION: MEGAN files corresponding to confirmed gammaherpervirus matching reads found within five Desmodus rotundus and Diphylla ecaudata vampire bat spleen samples. Viral assignment was performed using BLASTX against the GenBank non-redundant protein database and mapped with SMALT against a custom-built herpesviral database under a stringency of 60%. The γHV-matching reads were further selected by reciprocal BLASTX analysis using the following criteria: length of ≥100 bp, pairwise identity >50%, e-value <10-6, and independent hits to two different γHV proteins or at least two different regions of the same protein.

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dc.type.embargo

none

dc.format.extent

165279153

dc.identifier.uri

http://hdl.handle.net/10255/dryad.128732

dc.coverage.temporal

Present

dwc.ScientificName

Chiroptera, Gammaherpesvirinae

dc.coverage.spatial

Mexico

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