2k/1b densely sampled coding region sequence alignment
datasetposted on 18.12.2019, 05:19 by Reilly Hostager, Manon Raggonet-Cronin, Ben Murrell, Charlotte Hedskog, Anu Osinusi, Simone Susser, Christoph Sarrazin, Evguenia Svarovskaia, Joel Wertheim
Contains 109 sequences of Hepatitis C virus circulating recombinant form 2k/1b spanning the most densely sampled coding regions (i.e. at least 25 sequences in that region): Core/E1, NS2/NS3, NS4B, NS5A/NS5B, all concatenated. Aligned with MUSCLE v2.0 in AliView and edited manually.