2k1b_109_denselySampled_concatenatedCoreE1NS23NS4BNS5AB.fasta (425.99 kB)

2k/1b densely sampled coding region sequence alignment

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posted on 18.12.2019 by Reilly Hostager, Manon Raggonet-Cronin, Ben Murrell, Charlotte Hedskog, Anu Osinusi, Simone Susser, Christoph Sarrazin, Evguenia Svarovskaia, Joel Wertheim
Contains 109 sequences of Hepatitis C virus circulating recombinant form 2k/1b spanning the most densely sampled coding regions (i.e. at least 25 sequences in that region): Core/E1, NS2/NS3, NS4B, NS5A/NS5B, all concatenated. Aligned with MUSCLE v2.0 in AliView and edited manually.

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dc.format.extent

436218

dc.identifier.uri

http://hdl.handle.net/10255/dryad.226041

dwc.ScientificName

Hepacivirus C

dc.coverage.spatial

Azerbaijan, Uzbekistan, Russia, Georgia, Spain, United Kingdom, Belgium, the Netherlands, Germany, Austria, Romania, Greece, Belarus, Ukraine, Armenia, Chechnya, Tajikistan, Kazakhstan, United States

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