Aligned supermatrices & SNP matrices
datasetposted on 28.03.2018 by Lily Lewis, Elisabeth M Biersma, Sarah B Carey, Kent Holsinger, Stuart F McDaniel, Ricardo Rozzi, Bernard Goffinet
Datasets usually provide raw data for analysis. This raw data often comes in spreadsheet form, but can be any collection of data, on which analysis can be performed.
Add data sets referred to in Table 1 and Table 2 are included. Supermatrices are in nexus format and unlinked SNP files are in .str format, and include sample assignment information based on RAxML analyses (see Figure 1). Sample assignment information should not be used to inform STRUCTURE analyses however, but to help with graphical display and order of samples. All data files were produced in PyRAD v. 2.17. (Eaton 2014) Details of data file generation can be found in the main text and SI of the associated paper.