GBS_Fastq_BarcodeAdder_2Enzyme.pl (2.02 kB)

Custom Perl script for formatting paired-end GBS data for uneak pipeline

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posted on 17.12.2019 by Brook T. Moyers, Gregory L. Owens, Gregory J. Baute, Loren H. Rieseberg
This script translates paired-end fastq sequencing files into two independent sets of individually barcoded reads with a custom Perl script, to be used in the uneak pipeline (which is built only for single-end reads, from TASSEL 3; Lu et al., 2013). usage: perl GBS_Fastq_BarcodeAdder.pl uneak_key_file.txt library_1.fq library_2.fq combined_library_out.fq

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none

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2071

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http://hdl.handle.net/10255/dryad.141910

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