Dataset 7.1 Liver matrix.isoforms.counts
datasetposted on 28.03.2018 by Laura Grogan, Jason Mulvenna, Joel P. A. Gummer, Benjamin C. Scheele, Lee Berger, Scott D. Cashins, Michael S. McFadden, Peter Harlow, David A. Hunter, Robert D. Trengove, Lee F. Skerratt
Datasets usually provide raw data for analysis. This raw data often comes in spreadsheet form, but can be any collection of data, on which analysis can be performed.
Dataset 7 contains the raw gene/transcript counts data for each frog tissue sample (Experiment B, n = 61) resulting from allocation of sequence reads to genes from the transcriptome assemblies. These data are contained in Dataset 7, as 12 individual tab-separated text files (.txt) [Data Citation 1]. The four files for each tissue type (skin, liver and spleen) represent raw (1) counts, (2) TMM.EXPR files, (3) TPM.not_cross_norm files, and (4) normalisation information (as per the standard output from RSEM). The first row of these files (1-3 above) represents frog ID, and the first element of all subsequent rows represents transcript/isoform ID.