HawaiianTaro_SNP.vcf.zip (2.37 MB)

HawaiianTaro_SNP.vcf

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dataset
posted on 30.03.2018 by Martin Helmkampf, Thomas Wolfgruber, Renee Bellinger, Roshan Paudel, Michael Kantar, Susan Miyasaka, Heather Kimball, Ashley Brown, Anne Veillet, Andrew Read, Michael Shintaku
Zip archive of eight SNP datasets in VCF format, obtained by four SNP calling methods: GBS+RAD, GBS subset, transcriptome, and UNEAK (see Materials and methods). Each was filtered by minor allele count ≥ 2 (mac2) and minor allele frequency ≥ 0.1 (maf10). The primary dataset was based on GBS+RAD and mac2.

History

dc.type.embargo

none

dc.format.extent

2486070

dc.identifier.uri

http://hdl.handle.net/10255/dryad.154133

dc.coverage.spatial

Pacific

dc.coverage.temporal

Holocene

dwc.ScientificName

Colocasia esculenta

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