sorry, we can't preview this file

...but you can still download README

README. (1.28 kB)


Download (1.28 kB)
posted on 24.11.2019 by Fanny Pouyet
This dryad page provides the data and the source code for the figures in " Background selection and biased gene conversion affect more than 95% of the human genome and bias demographic inferences " by Pouyet F,* Aeschbacher S*, Thiery A and Excoffier L. * first co-authors It contains as compressed files: -- 1 -- Genotype tables and annotations from 1000G and SGDP data with README files that describe the data and how to use them. -- 2 -- the R scripts to perform the figures of INDA -- 3 -- the confidence intervals of the estimates as well as the source code to estimate them -- 4 -- the scripts (R and python) to make the SFS figures as well as estimate confidence intervals and compute the SFS -- 5 -- the setting parameters for FastSimCoal demographic inferences Supplementary file - settings files for demographi ... -- 6 -- the scripts for SLiM simulations and analyses (bash and R code) + a table with parameters used in the SLiM simulations (.csv) + the scripts and raw data that I used to make the figures (.txt and .R) si_files_SA.tar.gz Extra READMEs describe the files and how to launch them to compute the statistics or to make the figures.