Model code and input files
datasetposted on 09.04.2019 by Hanno Seebens, Elizabeta Briski, Sara Ghabooli, Tamara Shiganova, Hugh MacIsaac, Bernd Blasius
Datasets usually provide raw data for analysis. This raw data often comes in spreadsheet form, but can be any collection of data, on which analysis can be performed.
The zip file contains C scripts and input files of the model described in our paper. The model itself is implemented in 'MLNetSpread_Model.c', and two main files exploring the parameter space are provided. 'RunSimAnnMnemiopsisModel.c' applies simulated annealing to obtain a parameter settings, which fits the data best. 'RunAllParmSettingsMnemiopsisModel.c' explores the range of the parameter space by testing individual parameter settings and their influence on model fit. The 'Inputfiles.zip' contains all necessary data files to run the model including the shipping data, environmental conditions and genetic data used for model fitting.