R script: quality control
datasetposted on 24.07.2019 by TL Jenkins, CD Ellis, A Triantafyllidis, JR Stevens
Datasets usually provide raw data for analysis. This raw data often comes in spreadsheet form, but can be any collection of data, on which analysis can be performed.
R script used to explore and filter data. Includes analyses of missing data, Hardy-Weinberg equilibrium (HWE), linkage disequilibrium (LD), and heterozygosity.