Varga_2019_NEE_BAMM.zip (539.77 MB)

Results of the BAMM analysis

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posted on 15.03.2019 by Torda Varga, Krisztina Krizsán, Csenge Földi, Bálint Dima, Marisol Sánchez-García, Santiago Sánchez-Ramírez, Gergely J. Szöllősi, János G. Szarkándi, Viktor Papp, László Albert, William Andreopoulos, Claudio Angelini, Vladimír Antonín, Kerrie W. Barry, Neale L. Bougher, Peter Buchanan, Bart Buyck, Viktória Bense, Pam Catcheside, Mansi Chovatia, Jerry Cooper, Wolfgang Dämon, Dennis Desjardin, Péter Finy, József Geml, Sajeet Haridas, Karen Hughes, Alfredo F. Justo, Dariusz Karasiński, Ivona Kautmanova, Brigitta Kiss, Sándor Kocsubé, Heikki Kotiranta, Kurt M. LaButti, Bernardo E. Lechner, Kare Liimatainen, Anna Lipzen, Zoltán Lukács, Sirma Mihaltcheva, Louis Morgado, Tuula Niskanen, Machiel E. Noordeloos, Robin A. Ohm, Beatriz Ortiz-Santana, Clark Ovrebo, Nikolett Rácz, Robert Riley, Anton Savchenko, Anton Shiryaev, Karl Soop, Viacheslav Spirin, Csilla Szebenyi, Michal Tomšovský, Rodham E. Tulloss, Jessie Uehling, Igor V. Grigoriev, Csaba Vágvölgyi, Tamás Papp, Francis M. Martin, Otto Miettinen, David S. Hibbett, László G. Nagy
We used BAMM 2.5.0. (Bayesian Analysis of Macroevolutionary Mixtures), to examine rate heterogeneity across lineages and detect shifts in diversification rates. We analyzed 10 chronograms and ran MCMC analyses for 100 million generations using four independent chains per analysis with 50 million generations as burn-in. Prior parameters were optimized using the setBAMMpriors function in BAMMtools 2.1.6., except for the prior on the expected number of shifts, which was set to 270 based on preliminary runs.

History

dc.type.embargo

none

dc.format.extent

565986024

dc.identifier.uri

http://hdl.handle.net/10255/dryad.203513

dc.coverage.spatial

World wide

dc.coverage.temporal

Mesozoic era, Cenozoic era

dwc.ScientificName

Agaricomycetes

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