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SNP dataset retrieved from 176 whole-genome sequences (117 A. m. iberiensis, 28 A. m. carnica and 31 A. m. ligustica)

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posted on 28.03.2018 by Dora Henriques, Melanie Parejo, Alain Vignal, David Wragg, Andreas Wallberg, Matthew Webster, M. Alice Pinto
The dataset contains a total of 2,366,382 SNPs detected between 117 A. m. iberiensis, 28 A. m. carnica and 31 A. m. ligustica. SNP calling was performed using three different variant calling tools: GATK's, SAMtools’ mpileup 1.1 and PLATYPUS 0.8.1 Details for SNP processing and quality control is provided in the paper and its supplementary information.

History

dc.type.embargo

untilArticleAppears

dc.format.extent

76083418

dc.identifier.uri

http://hdl.handle.net/10255/dryad.172082

dc.coverage.spatial

Portugal, Spain, Italy, Switzerland, Croatia, Serbia

dwc.ScientificName

Apis mellifera

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