67p7po8x_93_1174_maf_no_out.txt (440.35 kB)

SNP loci of Dascyllus trimaculatus from the Western Indian Ocean

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dataset
posted on 07.05.2019 by Eva M Salas
The dataset contains 1,174 loci generated with ddRAD Sequencing, from single end reads, cleaned and trimmed to 95 bp. The format is for STRUCTURE. It contains 93 individuals from 7 populations. These loci were obtained with a STACKS denovo map using these filters: Loci shared in at least 65% of individuals within a group (r=0.65), shared between all populations (p=7), Coverage 8x (m=8), minor allele frequency 1.5% (maf=0.015) (i.e., at least two individuals must have the unique allele) Populations 1:NRS: Northern Red Sea 2:DJI: Djibouti 3:OMA: Oman 4:DGA: Diego de García, Chagos 5:ZAN: Zanzibar 6:MAY: Mayotte 7:JDN: Juan de Nova, Scattered Islands

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dc.format.extent

450917

dc.identifier.uri

http://hdl.handle.net/10255/dryad.175846

dc.coverage.spatial

Western Indian Ocean, Indian Ocean, Red Sea

dc.coverage.temporal

Red Sea

dwc.ScientificName

Dascyllus trimaculatus

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