get_small_tree.R (0.62 kB)

Script for tree subsampling

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posted on 19.12.2019 by David Černý, Kristen Lee, Jocelyn Medal, Daniel Blumstein
R script that subsamples the time-calibrated actinopterygian megaphylogeny from actinopt_12k_treePL.tre down to the species listed in FishSize.csv in order to produce small_tree.tre.

History

dc.format.extent

635

dc.identifier.uri

http://hdl.handle.net/10255/dryad.199124

dwc.ScientificName

Centropyge flavissima, Gomphosus varius, Centropyge bispinosa, Chaetodon citrinellus, Thalassoma hardwicke, Chaetodon lunulatus, Abudefduf sexfasciatus, Forcipiger flavissimus, Stegastes nigricans, Stegastes albifasciatus, Zebrasoma scopas, Chaetodon auriga, Heniochus chrysostomus, Balistapus undulatus, Chaetodon lunula, Pygoplites diacanthus, Chaetodon ulietensis, Zanclus cornutus, Arothron meleagris, Scarus oviceps, Chlorurus sordidus, Diodon hystrix

dc.coverage.spatial

French Polynesia

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