Sfontinalis.tar.gz (1.61 GB)

Stacks and Genepop files

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posted on 25.11.2019 by Vince P. Buonaccorsi, Jacob Malloy, Mark Peterson, Kristen Brubaker, Chris J. Grant
Stacks v 1.36 catalog files and alleles.tsv, matches.tsv, snps.tsv, and tags.tsv files for each individual mapped to Atlantic salmon reference genome. Also included are sumstats.tsv file "batch_1.sumstats.tsv" for individuals grouped into either Susquehanna or Allegheny river basins, and the final filtered GENEPOP file, "batch_1_genepop_HWE001_poolBias.txt" used for analysis after filtering for Hardy Weinberg deviations and for loci that were associated with library pool.

History

dc.type.embargo

none

dc.format.extent

1731318653

dc.identifier.uri

http://hdl.handle.net/10255/dryad.139458

dc.coverage.spatial

Pennsylvania, USA

dwc.ScientificName

Salvelinus fontinalis

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Exports