custom scripts used
datasetposted on 30.07.2019 by Andrew J. Johnson, Duane D, McKenna, Bjarte H. Jordal, Anthony I. Cognato, Sarah M. Smith, Alan R. Lemmon, Emily L. Moriarty Lemmon, Jiri Hulcr
Datasets usually provide raw data for analysis. This raw data often comes in spreadsheet form, but can be any collection of data, on which analysis can be performed.
Scripts used in sequence preparation. This contains one bash script "master_raw_to_alignment.sh" which undertakes simple bash commands which acts as a wrapper for various pieces of software and custom scripts. The rest of the files are specific python 3 scripts to complete specific tasks.