soil OTU table
datasetposted on 21.11.2019 by Maggie R. Wagner, Derek S. Lundberg, Devin Coleman-Derr, Susannah G. Tringe, Jeffery L. Dangl, Thomas Mitchell-Olds
Datasets usually provide raw data for analysis. This raw data often comes in spreadsheet form, but can be any collection of data, on which analysis can be performed.
Unrarefied soil OTU table. This table contains only "reproducible" OTUs that had at least 25 reads in at least 5 samples (note that this thresholding step was performed on a larger dataset that included hundreds of samples, not yet published). First column contains unique identifiers of observed OTUs. Other columns contain the number of reads for each OTU in each soil sample. This file was the input leading to the rarefied dataset ('soil_otu_table_rare40k.txt') used for all downstream analyses in the publication.