linkage map

2019-07-30T17:48:14Z (GMT) by Ryan Waples Jim Seeb Lisa Seeb
Tab-delimited text file giving the linkage group (LG) and cM (centiMorgan) position of each SNP. The remaining columns give different identifiers for the positions. "Contig" = aligned reference contig. "resolved_locus" = genetic locus, for non-duplicated loci this is the contig. For paralogous loci, multiple loci are associated with a contig. "stacks_CatID" and "stacks_SNP" give the identifiers given by the Stacks program. "LEPname" gives the locus identifier given by the LEPmap program.